Publications - Parameter Estimation

[1 — hz2009b]

T. Hohm and E. Zitzler. A Multiobjective Evolutionary Algorithm for Numerical Parameter Space Characterization of Reaction Diffusion Systems. In V. Kadirkamanathan et al., editors, International Conference on Pattern Recognition in Bioinformatics (PRIB 2009), volume 5780 of LNBI, pages 162–174, Heidelberg, Germany, 2009. Springer. (PDF) (doi) (bibtex) (online access)

[2 — hz2009c]

T. Hohm and E. Zitzler. Multicellular Pattern Formation: Parameter Estimation for ODE-based Gene Regulatory Network Models. IEEE Eng Med Biol, 28(4):52–57, 2009. (PDF) (bibtex) (suppl. material) Overall best paper award at PRIB '07

[3 — hz2009a]

T. Hohm and E. Zitzler. Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila. In F. Rothlauf et al., editors, GECCO '09: Genetic and Evolutionary Computation Conference (GECCO 2009), pages 209–216, New York, NY, USA, 2009. ACM. (PDF) (doi) (bibtex)

[4 — tjcn2007a]

M. Terzer, M. Jovanovic, A. Choutko, O. Nikolayeva, A. Korn, D. Brockhoff, F. Zürcher, M. Friedmann, R. Schütz, E. Zitzler, J. Stelling, and S. Panke. Design of a biological half adder. IET Synthetic Biology, 1(1–2):53–58, 2007. (PDF) (bibtex) (online access)

[5 — hz2007a]

T. Hohm and E. Zitzler. Modeling the Shoot Apical Meristem in A. thaliana: Parameter Estimation for Spatial Pattern Formation. In Elena Marchiori, Jason H. Moore, and Jagath C. Rajapakse, editors, Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (evoBIO 2007), volume 4447 of LNCS, pages 102–113. Springer, 2007. (PDF) (doi) (bibtex)